BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D07LP1|AL428210
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1681 1811 0.0
>3x_Contig1681
Length = 11798
Score = 1811 bits (913), Expect = 0.0
Identities = 946/953 (99%), Gaps = 6/953 (0%)
Strand = Plus / Minus
Query: 1 gatcataaggctgctaacgcctcttctgtgccaaaaatatgtcacaagtacctcggtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11369 gatcataaggctgctaacgcctcttctgtgccaaaaatatgtcacaagtacctcggtggt 11310
Query: 61 gctcaaaaaaaataatatgtgcaaaaaagtgaattttgttaggaacagcaacgatatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11309 gctcaaaaaaaataatatgtgcaaaaaagtgaattttgttaggaacagcaacgatatcca 11250
Query: 121 gccaatctccgattttttcggaggggctgccgtaattagtccctggtttcccttcccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11249 gccaatctccgattttttcggaggggctgccgtaattagtccctggtttcccttcccatc 11190
Query: 181 ccctccattggaggggcacacgttttcaatacgccggcgg-gaaaaatttggaaaaaatt 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11189 ccctccattggaggggcacacgttttcaatacgccggcggcgaaaaatttggaaaaaatt 11130
Query: 240 cacagtcacgcggataccacgtgattacaactttttcatggttttggtgccatttgcggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11129 cacagtcacgcggataccacgtgattacaactttttcatggttttggtgccatttgcggc 11070
Query: 300 cgctatgccaaagaaaaggaaaatctgaagtcgggaatgcaggagtatgcacataaaaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11069 cgctatgccaaagaaaaggaaaatctgaagtcgggaatgcaggagtatgcacataaaaac 11010
Query: 360 cctggtaggacatgtgtggtggggcgagagagaggggaatcggtaacgaggggggagagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11009 cctggtaggacatgtgtggtggggcgagagagaggggaatcggtaacgaggggggagagg 10950
Query: 420 ggcgggttaccccaggaggcaaggcaacaaagccgattcaagagccgaag---tattgtt 476
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 10949 ggcgggttaccccaggaggcaaggcaacaaagccgattcaagagccgaaggcttattgtt 10890
Query: 477 acttagatgccctttcggattgagatggagaacatgaaacagtccacacattggtatcgt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10889 acttagatgccctttcggattgagatggagaacatgaaacagtccacacattggtatcgt 10830
Query: 537 gactgggtactttgtgcctgagtcgtttagctggacttttcatttcttctgaaataggta 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10829 gactgggtactttgtgcctgagtcgtttagctggacttttcatttcttctgaaataggta 10770
Query: 597 gggcttaggataacagtgttacagtgtttattgctgtgggtcccgtttcggagatgacaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10769 gggcttaggataacagtgttacagtgtttattgctgtgggtcccgtttcggagatgacaa 10710
Query: 657 ggcccgtacctacgtttgctttgtaactactgtatatatgggtttcttaatggactttca 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10709 ggcccgtacctacgtttgctttgtaactactgtatatatgggtttcttaatggactttca 10650
Query: 717 gatcttgtggttagtggtagtgaatgcccgggacgaggttcaccggggagctagggttga 776
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10649 gatcttgtggttagtggtagtgaatgcccgggacgaggttcacc-gggagctagggttga 10591
Query: 777 gacggtgtattactgagtttattgttgtgatggaatgtatagtggggtaggttcacgtga 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10590 gacggtgtattactgagtttattgttgtgatggaatgtatagtggggtaggttcacgtga 10531
Query: 837 tacattttcgtaacggactctagactcttcgtatgagggtaa-ctctggaggtgacttag 895
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10530 tacattttcgtaacggactctagactcttcgtatgagggtaacctctggaggtgacttag 10471
Query: 896 gagatctgtcattgaggctgcgttacttgaggcattgctgctgacgcctargg 948
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10470 gagatctgtcattgaggctgcgttacttgaggcattgctgctgacgcctaggg 10418
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5477
Number of Sequences: 1807
Number of extensions: 5477
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)